Dipl.-Inf. Dr. Dominik Kopczynski
Sommersemester 2025
Wintersemester 2024
1 - 16 von 16
Kopczynski, D., Ejsing, C. S., McDonald, J. G., Bamba, T., Baker, E. S., Bertrand-Michel, J., Brügger, B., Coman, C., Ellis, S. R., Garrett, T. J., Griffiths, W. J., Guan, X. L., Han, X., Höring, M., Holčapek, M., Hoffmann, N., Huynh, K., Lehmann, R., Jones, J. W., ... Liebisch, G. (2024). The lipidomics reporting checklist a framework for transparency of lipidomic experiments and repurposing resource data. Journal of Lipid Research, 65(9), Artikel 100621. https://doi.org/10.1016/j.jlr.2024.100621

Witting, M., Malik, A., Leach, A., Bridge, A., Aimo, L., Conroy, M. J., O’Donnell, V. B., Hoffmann, N., Kopczynski, D., Giacomoni, F., Paulhe, N., Gassiot, A. C., Poupin, N., Jourdan, F., & Bertrand-Michel, J. (2024). Challenges and perspectives for naming lipids in the context of lipidomics. Metabolomics, 20(1), Artikel 15. https://doi.org/10.1007/s11306-023-02075-x

Heimerl, S., Höring, M., Kopczynski, D., Sigruener, A., Hart, C., Burkhardt, R., Black, A., Ahrends, R., & Liebisch, G. (2023). Quantification of bulk lipid species in human platelets and their thrombin-induced release. Scientific Reports, 13(1), Artikel 6154. https://doi.org/10.1038/s41598-023-33076-4






Ni, Z., Wolk, M., Jukes, G., Espinosa, K. M., Ahrends, R., Aimo, L., Alvarez-Jarreta, J., Andrews, S., Andrews, R., Bridge, A., Clair, G. C., Conroy, M. J., Fahy, E., Gaud, C., Goracci, L., Hartler, J., Hoffmann, N., Kopczynski, D., Korf, A., ... Fedorova, M. (2023). Guiding the choice of informatics software and tools for lipidomics research applications. Nature Methods, 20(2), 193-204. https://doi.org/10.1038/s41592-022-01710-0

Kopczynski, D., Krause, D., Al Machot, F., Schwudke, D., Hoffmann, N., & Ahrends, R. (2023). The Past and Future of Lipidomics Bioinformatics. in Mass Spectrometry for Lipidomics: Methods and Applications (S. 271-290). Wiley. https://doi.org/10.1002/9783527836512.ch10

McDonald, J. G., Ejsing, C. S., Kopczynski, D., Holcapek, M., Aoki, J., Arita, M., Arita, M., Baker, E. S., Bertrand-Michel, J., Bowden, J. A., Brugger, B., Ellis, S. R., Fedorova, M., Griffiths, W. J., Han, X., Hartler, J., Hoffmann, N., Koelmel, J. P., Kofeler, H. C., ... Ekroos, K. (2022). Introducing the Lipidomics Minimal Reporting Checklist. Nature Metabolism, 4(9), 1086-1088. https://doi.org/10.1038/s42255-022-00628-3

Hoffmann, N., Mayer, G., Has, C., Kopczynski, D., Al Machot, F., Schwudke, D., Ahrends, R., Marcus, K., Eisenacher, M., & Turewicz, M. (2022). A Current Encyclopedia of Bioinformatics Tools, Data Formats and Resources for Mass Spectrometry Lipidomics. Metabolites, 12(7), Artikel 584. https://doi.org/10.3390/metabo12070584


Kopczynski, D., Hentschel, A., Coman, C., Schebb, N. H., Hornemann, T., Mashek, D. G., Hartung, N. M., Shevchuk, O., Schott, H.-F., Lorenz, K., Torta, F., Burla, B., Zahedi, R. P., Sickmann, A., Kreutz, M. R., Ejsing, C. S., Medenbach, J., & Ahrends, R. (2020). Simple Targeted Assays for Metabolic Pathways and Signaling: A Powerful Tool for Targeted Proteomics. Analytical Chemistry, 92(20), 13672-13676. https://doi.org/10.1021/acs.analchem.0c02793


Peng, B., Kopczynski, D., Pratt, B. S., Ejsing, C. S., Burla, B., Hermansson, M., Benke, P. I., Tan, S. H., Chan, M. Y., Torta, F., Schwudke, D., Meckelmann, S. W., Coman, C., Schmitz, O. J., MacLean, B., Manke, M.-C., Borst, O., Wenk, M. R., Hoffmann, N., & Ahrends, R. (2020). LipidCreator workbench to probe the lipidomic landscape. Nature Communications, 11(1), Artikel 2057. https://doi.org/10.1038/s41467-020-15960-z

1 - 16 von 16

Status and Perspectives of the Lipidomics Reporting Checklist

Dominik Kopczynski (Invited speaker) & Robert Ahrends (Autor*in)

24 Feb. 2025

Aktivität: VorträgeVortragScience to Science


Status and Perspectives of the Lipidomics Reporting Checklist

Dominik Kopczynski (Vortragende*r) & Robert Ahrends (Autor*in)

1 Sept. 2024

Aktivität: VorträgeVortragScience to Science


Status and Perspectives of the Lipidomics Reporting Checklist

Dominik Kopczynski (Vortragende*r) & Robert Ahrends (Autor*in)

5 Mai 2024

Aktivität: VorträgeVortragScience to Science


LORA: Lipid Over-Representation Analysis based on structural information

Michaela Vondrackova (Vortragende*r), Dominik Kopczynski (Autor*in), Nils Hoffmann (Autor*in) & Kuda Ondře (Autor*in)

27 Aug. 2023

Aktivität: VorträgeVortragScience to Science


Beyond good lipidomics practice

Robert Ahrends (Invited speaker), Dominik Kopczynski (Autor*in) & Gerhard Liebisch (Autor*in)

8 Apr. 2022

Aktivität: VorträgeVortragScience to Science


LipidCreator workbench to probe the lipidomics landscape

Bing Peng (Autor*in), Dominik Kopczynski (Vortragende*r), Cristina Coman (Autor*in), Nils Hoffmann (Autor*in) & Robert Ahrends (Autor*in)

7 Okt. 2021

Aktivität: VorträgeVortragScience to Science


Institut für Analytische Chemie

Sensengasse 8
1090 Wien
Zimmer: 2012

dominik.kopczynski@univie.ac.at