Assoz. Prof. Dipl.-Biol. Dr. Robert Ahrends, Privatdoz.
T: +43-1-4277-52304
Hoffmann, N., Mayer, G., Has, C., Kopczynski, D., Machot, F. A., Schwudke, D., Ahrends, R., Marcus, K., Eisenacher, M., & Turewicz, M. (2022). A Current Encyclopedia of Bioinformatics Tools, Data Formats and Resources for Mass Spectrometry Lipidomics. Metabolites, 12(7). https://doi.org/10.3390/metabo12070584



Michel, L., Helfrich, I., Hendgen-Cotta, U. B., Mincu, R-I., Korste, S., Mrotzek, S. M., Spomer, A., Odersky, A., Rischpler, C., Herrmann, K., Umutlu, L., Coman, C., Ahrends, R., Sickmann, A., Löffek, S., Livingstone, E., Ugurel, S., Zimmer, L., Gunzer, M., ... Rassaf, T. (2022). Targeting early stages of cardiotoxicity from anti-PD1 immune checkpoint inhibitor therapy. European Heart Journal, 43(4), 316-329. https://doi.org/10.1093/eurheartj/ehab430

Wolrab, D., Jirasko, R., Cifkova, E., Horing, M., Mei, D., Chocholouskova, M., Peterka, O., Idkowiak, J., Hrnciarova, T., Kuchar, L., Ahrends, R., Brumarova, R., Friedecky, D., Vivo-Truyols, G., Skrha, P., Skrha, J., Kucera, R., Melichar, B., Liebisch, G., ... Holcapek, M. (2022). Lipidomic profiling of human serum enables detection of pancreatic cancer. Nature Communications, 13(1), [124]. https://doi.org/10.1038/s41467-021-27765-9

Confettura, A. D., Cuboni, E., Ammar, M. R., Jia, S., Gomes, G. M., Yuanxiang, P., Raman, R., Li, T., Grochowska, K. M., Ahrends, R., Karpova, A., Dityatev, A., & Kreutz, M. R. (2022). Neddylation-dependent protein degradation is a nexus between synaptic insulin resistance, neuroinflammation and Alzheimer's disease. Translational neurodegeneration, 11(1), [2]. https://doi.org/10.1186/s40035-021-00277-8

Borgmeyer, M., Coman, C., Has, C., Schoett, H-F., Li, T., Westhoff, P., Cheung, Y. F. H., Hoffmann, N., Yuanxiang, P., Behnisch, T., Gomes, G. M., Dumenieu, M., Schweizer, M., Chocholouskova, M., Holcapek, M., Mikhaylova, M., Kreutz, M. R., & Ahrends, R. (2021). Multiomics of synaptic junctions reveals altered lipid metabolism and signaling following environmental enrichment. Cell Reports, 37(1), [109797]. https://doi.org/10.1016/j.celrep.2021.109797

Manke, M-C., Geue, S., Coman, C., Peng, B., Kollotzek, F., Muenzer, P., Walker, B., Huber, S. M., Rath, D., Sickmann, A., Stegner, D., Duerschmied, D., Lang, F., Nieswandt, B., Gawaz, M., Ahrends, R., & Borst, O. (2021). ANXA7 Regulates Platelet Lipid Metabolism and Ca2+ Release in Arterial Thrombosis. Circulation Research, 129(4), 494-507. https://doi.org/10.1161/CIRCRESAHA.121.319207

Koefeler, H. C., Eichmann, T. O., Ahrends, R., Bowden, J. A., Danne-Rasche, N., Dennis, E. A., Fedorova, M., Griffiths, W. J., Han, X., Hartler, J., Holcapek, M., Jirasko, R., Koelmel, J. P., Ejsing, C. S., Liebisch, G., Ni, Z., O'Donnell, V. B., Quehenberger, O., Schwudke, D., ... Ekroos, K. (2021). Quality control requirements for the correct annotation of lipidomics data. Nature Communications, 12(1), [4771]. https://doi.org/10.1038/s41467-021-24984-y


Koefeler, H. C., Ahrends, R., Baker, E. S., Ekroos, K., Han, X., Hoffmann, N., Holcapek, M., Wenk, M. R., & Liebisch, G. (2021). Recommendations for good practice in MS-based lipidomics. Journal of Lipid Research, 62, [100138]. https://doi.org/10.1016/j.jlr.2021.100138


van Geffen, J. P., Swieringa, F., van Kuijk, K., Tullemans, B. M. E., Solari, F. A., Peng, B., Clemetson, K. J., Farndale, R. W., Dubois, L. J., Sickmann, A., Zahedi, R. P., Ahrends, R., Biessen, E. A. L., Sluimer, J. C., Heemskerk, J. W. M., & Kuijpers, M. J. E. (2020). Mild hyperlipidemia in mice aggravates platelet responsiveness in thrombus formation and exploration of platelet proteome and lipidome. Scientific Reports, 10(1), [21407]. https://doi.org/10.1038/s41598-020-78522-9

Michel, L., Hendgen-Cotta, U. B., Mincu, R., Helfrich, E. J. N., Korste, S., Mrolzek, S. M., Rischpler, C., Herrmann, K., Ugurel, S., Zimmer, L., Coman, C., Ahrends, R., Schadendorf, D., Rassaf, T., & Totzeck, M. (2020). Preclinical and clinical assessment of immune checkpoint inhibitor-associated left ventricular dysfunction. European Heart Journal, 41, 3260-3260.

Kopczynski, D., Hentschel, A., Coman, C., Schebb, N. H., Hornemann, T., Mashek, D. G., Hartung, N. M., Shevchuk, O., Schott, H-F., Lorenz, K., Torta, F., Burla, B., Zahedi, R. P., Sickmann, A., Kreutz, M. R., Ejsing, C. S., Medenbach, J., & Ahrends, R. (2020). Simple Targeted Assays for Metabolic Pathways and Signaling: A Powerful Tool for Targeted Proteomics. Analytical Chemistry, 92(20), 13672-13676. https://doi.org/10.1021/acs.analchem.0c02793


Reich, S., Nguyen, C. D. L., Has, C., Steltgens, S., Soni, H., Coman, C., Freyberg, M., Bichler, A., Seifert, N., Conrad, D., Knobbe-Thomsen, C. B., Tews, B., Toedt, G., Ahrends, R., & Medenbach, J. (2020). A multi-omics analysis reveals the unfolded protein response regulon and stress-induced resistance to folate-based antimetabolites. Nature Communications, 11(1), [2936]. https://doi.org/10.1038/s41467-020-16747-y



Peng, B., Kopczynski, D., Pratt, B. S., Ejsing, C. S., Burla, B., Hermansson, M., Benke, P. I., Tan, S. H., Chan, M. Y., Torta, F., Schwudke, D., Meckelmann, S. W., Coman, C., Schmitz, O. J., MacLean, B., Manke, M-C., Borst, O., Wenk, M. R., Hoffmann, N., & Ahrends, R. (2020). LipidCreator workbench to probe the lipidomic landscape. Nature Communications, 11(1). https://doi.org/10.1038/s41467-020-15960-z

A Lipid-centric Multiomics Approach for Complex Systems

Robert Ahrends (Invited speaker)

30 Mar 2022

Activity: Talks and presentationsTalk or oral contributionScience to Science


Probing the platelet lipidome from lipid structure to function

Robert Ahrends (Speaker)

9 Dec 2021

Activity: Talks and presentationsTalk or oral contributionScience to Science


Lipidomics from structure to function new frontiers in lipid research

Cristina Coman (Speaker), Maximilian Borgmeyer (Contributor), Michael R. Kreutz (Contributor) & Robert Ahrends (Contributor)

26 Nov 2021

Activity: Talks and presentationsTalk or oral contributionScience to Science


Multiomics reveals altered lipid metabolism and signaling upon environmental enrichment in synaptic junctions

Cristina Coman (Speaker), Maximilian Borgmeyer (Contributor), Canan Has (Contributor), Hans-Frieder Schott (Contributor), Tingting Li (Contributor), Philipp Westhoff (Contributor), Hilaire Yam Fung Cheung (Contributor), Nils Hoffmann (Contributor), Michaela Schweizer (Contributor), Michal Holcapek (Contributor), Marina Mikhaylova (Contributor), Michael R. Kreutz (Contributor) & Robert Ahrends (Contributor)

9 Nov 2021

Activity: Talks and presentationsTalk or oral contributionScience to Science


A comprehensive and quantitative multiomics analysis of murine megakaryocytes during maturation

Bianca de Jonckheere (Speaker) & Robert Ahrends (Contributor)

20 Oct 2021

Activity: Talks and presentationsTalk or oral contributionScience to Science


A targeted lipidomics workflow to dissect sphingolipid metabolism in adipogenesis

Nina Nicole Troppmair (Speaker) & Robert Ahrends (Contributor)

20 Oct 2021

Activity: Talks and presentationsTalk or oral contributionScience to Science


Development and Application of Chromatographic Methods for Lipidomic Analyses

Stefanie Rubenzucker (Speaker) & Robert Ahrends (Contributor)

20 Oct 2021

Activity: Talks and presentationsTalk or oral contributionScience to Science


LipidCreator workbench to probe the lipidomics landscape

Bing Peng (Contributor), Dominik Kopczynski (Speaker), Cristina Coman (Contributor), Nils Hoffmann (Contributor) & Robert Ahrends (Contributor)

7 Oct 2021

Activity: Talks and presentationsTalk or oral contributionScience to Science


Multiomics of synaptic junctions reveals altered lipid metabolism and signaling upon environmental enrichment

Cristina Coman (Speaker), Maximilian Borgmeyer (Contributor), Canan Has (Contributor), Hans-Frieder Schott (Contributor), Tingting Li (Contributor), Philipp Westhoff (Contributor), Hilaire Yam Fung Cheung (Contributor), Nils Hoffmann (Contributor), Michaela Schweizer (Contributor), Michal Holcapek (Contributor), Marina Mikhaylova (Contributor), Michael R. Kreutz (Contributor) & Robert Ahrends (Contributor)

5 Oct 2021

Activity: Talks and presentationsTalk or oral contributionScience to Science


Probing the platelet lipidome and identifying key lipids critical for platelet activation by comprehensive lipidomics

Robert Ahrends (Speaker) & Oliver Borst (Contributor)

5 Oct 2021

Activity: Talks and presentationsTalk or oral contributionScience to Science


The LIFS tools and workflows for mass-spectrometry based lipidomics

Nils Hoffmann (Speaker) & Robert Ahrends (Contributor)

5 Oct 2021

Activity: Talks and presentationsTalk or oral contributionScience to Science


The lipid crosstalk of thrombo-inflammatory cells and its modulating effect on thrombus formation

Robert Ahrends (Speaker) & Patrick Münzer (Contributor)

27 Sep 2021

Activity: Talks and presentationsTalk or oral contributionScience to Science


Multiomics of synaptic junctions reveals altered lipid metabolism and signaling following environmental enrichment

Robert Ahrends (Speaker)

20 Sep 2021

Activity: Talks and presentationsTalk or oral contributionScience to Science


A KNIME workflow for processing data from targeted lipidomics approaches

Nina Nicole Troppmair (Speaker) & Robert Ahrends (Contributor)

11 Jun 2021

Activity: Talks and presentationsTalk or oral contributionScience to Science


Lipidomic analysis of murine megakaryocytes during maturation

Bianca de Jonckheere (Speaker) & Robert Ahrends (Contributor)

11 Jun 2021

Activity: Talks and presentationsTalk or oral contributionScience to Science


LipidCreator

Robert Ahrends (Invited speaker)

12 Apr 2021

Activity: Talks and presentationsTalk or oral contributionScience to Science


Lipid Compass probing the lipidomics landscape

Robert Ahrends (Invited speaker)

1 Mar 2021

Activity: Talks and presentationsTalk or oral contributionScience to Science


Lipidomics from lipid structure to lipid function

Robert Ahrends (Invited speaker)

19 Jan 2021

Activity: Talks and presentationsTalk or oral contributionScience to Science


LIFS Bioinformatics / Data Integration and Applications

Robert Ahrends (Speaker)

29 Sep 2020

Activity: Talks and presentationsTalk or oral contributionScience to Science


LipidCreator workbench to probe the lipidomic landscape

Robert Ahrends (Speaker)

13 Jul 2020

Activity: Talks and presentationsTalk or oral contributionScience to Science


Lipid Creator

Robert Ahrends (Speaker)

17 Apr 2020

Activity: Talks and presentationsTalk or oral contributionScience to Science


Lipid Compass

Nils Hoffmann (Speaker) & Robert Ahrends (Contributor)

1 Mar 2020

Activity: Talks and presentationsTalk or oral contributionScience to Science


Lipidomics Bioinformatics for Life Sciences

Robert Ahrends (Invited speaker)

1 Mar 2020

Activity: Talks and presentationsTalk or oral contributionScience to Science


LipidCreator: A workbench to probe the lipidomic landscape

Robert Ahrends (Speaker)

25 Feb 2020

Activity: Talks and presentationsTalk or oral contributionScience to Science


LILY-Lipidome Isotope Labeling of Yeast: In vivo synthesis of 13C labeled reference lipids for quantification by mass spectrometry

Evelyn Rampler (Speaker), Cristina Coman (Contributor), Gerrit Hermann (Contributor), Kristaps Klavins (Contributor), Robert Ahrends (Contributor) & Gunda Köllensperger (Contributor)

13 Nov 2016

Activity: Talks and presentationsTalk or oral contributionScience to Science


Production of 13C labeled reference lipids for absolute quantification by mass spectrometry

Evelyn Rampler (Speaker), Cristina Coman (Contributor), Gerrit Hermann (Contributor), Kristaps Klavins (Contributor), Robert Ahrends (Contributor) & Gunda Köllensperger (Contributor)

5 Sep 2016

Activity: Talks and presentationsTalk or oral contributionScience to Science


Department of Analytical Chemistry

Währinger Straße 38
1090 Wien

T: +43-1-4277-52304

robert.ahrends@univie.ac.at