Dr. Harald Schöny, BSc. MSc
Winter term 2024
Summer term 2024
Winter term 2023



Rebnegger, C., Coltman, B. L., Kowarz, V., Peña, D. A., Mentler, A., Troyer, C., Hann, S., Schoeny, H., Koellensperger, G., Mattanovich, D., & Gasser, B. (2024). Protein production dynamics and physiological adaptation of recombinant Komagataella phaffii at near-zero growth rates. Microbial Cell Factories, 23(1), Article 43. https://doi.org/10.1186/s12934-024-02314-3

Zuffa, S., Schmid, R., Bauermeister, A., Paulo, P. W., Caraballo-Rodriguez, A. M., El Abiead, Y., Aron, A. T., Gentry, E. C., Zemlin, J., Meehan, M. J., Avalon, N. E., Cichewicz, R. H., Buzun, E., Terrazas, M. C., Hsu, C. Y., Oles, R., Ayala, A. V., Zhao, J., Chu, H., ... Dorrestein, P. C. (2024). microbeMASST: a taxonomically informed mass spectrometry search tool for microbial metabolomics data. Nature Microbiology, 9(2), 336-345. https://doi.org/10.1038/s41564-023-01575-9







Széliová, D., Ruckerbauer, D. E., Galleguillos, S. N., Petersen, L. B., Natter, K., Hanscho, M., Troyer, C., Causon, T., Schoeny, H., Christensen, H. B., Lee, D. Y., Lewis, N. E., Koellensperger, G., Hann, S., Nielsen, L. K., Borth, N., & Zanghellini, J. (2020). What CHO is made of: Variations in the biomass composition of Chinese hamster ovary cell lines. Metabolic engineering, 61, 288-300. https://doi.org/10.1016/j.ymben.2020.06.002


Széliová, D., Schoeny, H., Knez, Š., Troyer, C., Coman, C., Rampler, E., Koellensperger, G., Ahrends, R., Hann, S., Borth, N., Zanghellini, J., & Ruckerbauer, D. E. (2020). Robust analytical methods for the accurate quantification of the total biomass composition of mammalian cells. In D. Nagrath (Ed.), METABOLIC FLUX ANALYSIS IN EUKARYOTIC CELLS: METHODS AND PROTOCOLS (pp. 119-160). Humana Press, Inc.. https://doi.org/10.1007/978-1-0716-0159-4_7






Schwaiger, M., Hermann, G., Schöny, H., El Abiead, Y., Rampler, E., & Köllensperger, G. (2018). Merging Metabolomics and Lipidomics in One Analytical Run by Parallel HILIC/RP-HRMS. In R. A. Yost (Ed.), Conference Proceedings

Less is More: Enhancing Glioblastoma Metabolomics by Minimizing Tissue Requirements

Christina Brenner (Speaker), Sagar Acharya (Contributor), Gilbert Hangel (Contributor), Lisa Panzenböck (Contributor), Harald Schöny (Contributor) & Gunda Köllensperger (Contributor)

23 Sept 2024

Activity: Talks and presentationsTalk or oral contributionScience to Science


Get on the TRAM - Combining targeted and non-targeted metabolomics in a single run on the ZenoTOF 7600

Lisa Panzenböck (Invited speaker), Harald Schöny (Contributor), Bruno Stelzer (Contributor), Elisabeth Föls (Contributor), Marvin Glas (Contributor), Marlene Pühringer (Contributor), Dorian Hirschmann (Contributor), Daniela Loetsch (Contributor), Christian Dorfer (Contributor), Evelyn Rampler (Contributor) & Gunda Köllensperger (Contributor)

18 Sept 2024

Activity: Talks and presentationsTalk or oral contributionScience to Science


Challenges of integrating metallome analysis in exposomics workflows

Simone Bräuer (Speaker), Max Lennart Feuerstein (Contributor), Elisabeth Föls (Speaker), Harald Schöny (Contributor), Tina Buerki-Thurnherr (Contributor), Raimund Widhalm (Contributor), Claudia Gundacker (Contributor), Benedikt Warth (Contributor) & Gunda Köllensperger (Contributor)

24 Jun 2024

Activity: Talks and presentationsTalk or oral contributionScience to Science


METAL ISOTOPE PATTERN RECOGNITION IN HIGH-RESOLUTION MASS SPECTROMETRY: UNVEILING THE METABOLOMIC PATHWAYS OF BOLD 100 AND RELATED METAL BASED ISOTOPE PATTERNS

Claude Molitor (Speaker), David Loibnegger (Contributor), Yasin El Abiead (Contributor), Harald Schöny (Contributor), Bernhard Keppler (Contributor) & Gunda Köllensperger (Contributor)

17 Jun 2024

Activity: Talks and presentationsTalk or oral contributionScience to Science


Compact Samples, Comprehensive Analysis: Miniaturized Sample Preparation for Glioblastoma Metabolomics

Christina Brenner (Speaker), Sagar Acharya (Contributor), Gilbert Hangel (Contributor), Lisa Panzenböck (Contributor), Harald Schöny (Contributor) & Gunda Köllensperger (Contributor)

16 May 2024

Activity: Talks and presentationsTalk or oral contributionScience to Science


Assessing the Muscle Metabolome in Malignant Hyperthermia

Helena Hyo Gyoung Kim (Speaker), Harald Schöny (Contributor), Andrea Michalek-Sauberer (Contributor), Sergej Milovic (Contributor), Lukas Weigl (Contributor), Ibarra Moreno (Contributor), Janusz Pawliszyn (Contributor), Coral Barbas (Contributor), Barbara Bojko (Contributor) & Gunda Köllensperger (Contributor)

15 May 2024

Activity: Talks and presentationsTalk or oral contributionScience to Science


Compact Samples, Comprehensive Analysis: Miniaturized Sample Preparation for Glioblastoma Metabolomics

Christina Brenner (Speaker), Sagar Acharya (Contributor), Gilbert Hangel (Contributor), Lisa Panzenböck (Contributor), Harald Schöny (Contributor) & Gunda Köllensperger (Contributor)

24 Apr 2024

Activity: Talks and presentationsTalk or oral contributionScience to Science


Internal one-point calibration using isotopically labeled biomass for IDMS-metabolomics

Veronika Fitz (Speaker), Lisa Panzenböck (Contributor), Harald Schöny (Contributor) & Gunda Köllensperger (Contributor)

21 Feb 2024

Activity: Talks and presentationsTalk or oral contributionScience to Science


Cross-Validation in Lipidomics – towards a standardized and harmonized omics discipline

Harald Schöny (Speaker) & Gunda Köllensperger (Contributor)

27 Sept 2023

Activity: Talks and presentationsTalk or oral contributionScience to Science


Ultraviolet Photodissociation and Electron-Activated Dissociation Fragmentation Strategies for the Structural Characterization of Gangliosides

Katharina Hohenwallner (Speaker), Marlene Pühringer (Speaker), Leonida M. Lamp (Contributor), Harald Schöny (Contributor), Gunda Köllensperger (Contributor), Gavin Reid (Contributor), Jürgen Hartler (Contributor) & Evelyn Rampler (Contributor)

27 Sept 2023

Activity: Talks and presentationsTalk or oral contributionScience to Science


Quantitative metabolomics – the power of isotopically labelled biomass

Harald Schöny (Contributor), Veronika Fitz (Contributor), Lisa Panzenböck (Contributor), Felina Hildebrand (Contributor) & Gunda Köllensperger (Keynote speaker)

18 Jun 2023

Activity: Talks and presentationsTalk or oral contributionScience to Science


Accurate Lipid Quantification- Challenges and Solutions

Harald Schöny (Speaker) & Gunda Köllensperger (Contributor)

11 May 2023

Activity: Talks and presentationsTalk or oral contributionScience to Science


Optimizing high-throughput sample preparation of volumetric absorptive microsampling (VAMS) for targeted LC-MS metabolomics

Bruno Stelzer (Speaker), Harald Schöny (Contributor) & Gunda Köllensperger (Contributor)

11 May 2023

Activity: Talks and presentationsTalk or oral contributionScience to Science


LC-HRMS Metabolomics and Lipidomics of Human Meningioma Tissue and Cerebrospinal Fluid

Lisa Panzenböck (Speaker), Elisabeth Foels (Contributor), Yasin El Abiead (Contributor), Dorian Hirschmann (Contributor), Petra Volejnik (Contributor), Daniela Loetsch (Contributor), Christian Dorfer (Contributor), Harald Schöny (Contributor), Evelyn Rampler (Contributor) & Gunda Köllensperger (Contributor)

19 Sept 2022

Activity: Talks and presentationsTalk or oral contributionScience to Science


Metabolomics- fit for purpose workflows

Harald Schöny (Contributor), Yasin El Abiead (Contributor), Evelyn Rampler (Contributor), Veronika Fitz (Contributor), Lisa Panzenböck (Contributor), Felina Hildebrand (Contributor), Gerrit Hermann (Contributor), Mate Rusz (Contributor) & Gunda Köllensperger (Keynote speaker)

18 Sept 2022

Activity: Talks and presentationsTalk or oral contributionScience to Science


Metabolomics- Validation in omics-scale of analysis

Harald Schöny (Contributor), Yasin El Abiead (Contributor), Evelyn Rampler (Contributor), Veronika Fitz (Contributor), Lisa Panzenböck (Contributor), Felina Hildebrand (Contributor), Gerrit Hermann (Contributor), Mate Rusz (Contributor) & Gunda Köllensperger (Keynote speaker)

15 Sept 2022

Activity: Talks and presentationsTalk or oral contributionScience to Science


Metabolomics and Lipidomics Analysis of Human Meningioma Tissue and Cerebrospinal Fluid Within a Single Analytical Run

Lisa Panzenböck (Speaker), Elisabeth Foels (Contributor), Yasin El Abiead (Contributor), Dorian Hirschmann (Contributor), Petra Volejnik (Contributor), Daniela Loetsch (Contributor), Christian Dorfer (Contributor), Harald Schöny (Contributor), Evelyn Rampler (Contributor) & Gunda Köllensperger (Contributor)

13 Sept 2022

Activity: Talks and presentationsTalk or oral contributionScience to Science


Metabolomics enabled by isotopically labelled biomass

Harald Schöny (Contributor), Yasin El Abiead (Contributor), Evelyn Rampler (Contributor), Veronika Fitz (Contributor), Lisa Panzenböck (Contributor), Felina Hildebrand (Contributor), Gerrit Hermann (Contributor), Mate Rusz (Contributor) & Gunda Köllensperger (Keynote speaker)

12 Jul 2022

Activity: Talks and presentationsTalk or oral contributionScience to Science


Scrutinizing and Compensating Different Ionization Responses of Phospholipids in a Reversed-phase Gradient by Implementing a Counter Gradient

Felina Hildebrand (Speaker), Harald Schöny (Contributor), Evelyn Rampler (Contributor) & Gunda Köllensperger (Contributor)

18 Jun 2022

Activity: Talks and presentationsTalk or oral contributionScience to Science


Simultaneous Metabolomics and Lipidomics Analysis of Human Meningioma Tissue and Cerebrospinal Fluid

Lisa Panzenböck (Speaker), Elisabeth Foels (Contributor), Yasin El Abiead (Contributor), Dorian Hirschmann (Contributor), Petra Volejnik (Contributor), Daniela Loetsch (Contributor), Christian Dorfer (Contributor), Harald Schöny (Contributor), Evelyn Rampler (Contributor) & Gunda Köllensperger (Contributor)

18 Jun 2022

Activity: Talks and presentationsTalk or oral contributionScience to Science


Scrutinizing and Compensating Different Ionization Responses of Phospholipids in a Reversed-phase Gradient by Implementing a Counter Gradient

Felina Hildebrand (Speaker), Harald Schöny (Contributor), Evelyn Rampler (Contributor) & Gunda Köllensperger (Contributor)

13 Jun 2022

Activity: Talks and presentationsTalk or oral contributionScience to Science


Scrutinizing current limits of non-targeted data pre-processing

Yasin El Abiead (Speaker), Maximilian Milford (Contributor), Harald Schöny (Contributor) & Gunda Köllensperger (Contributor)

31 Oct 2021

Activity: Talks and presentationsTalk or oral contributionScience to Science


Novel analytical methods for quantitative lipidomics and non-targeted metabolomics using high resolution mass spectrometry

Felina Hildebrand (Speaker), Harald Schöny (Contributor), Evelyn Rampler (Contributor) & Gunda Köllensperger (Contributor)

20 Oct 2021

Activity: Talks and presentationsTalk or oral contributionScience to Science


A novel lipid droplet specific LC-MSn workflow for investigating therapy-resistance mechanisms in human colon cancer

Katharina Hohenwallner (Invited speaker), Dina Baier (Contributor), Theresa Mendrina (Contributor), Harald Schöny (Contributor), Gunda Köllensperger (Contributor), Walter Berger (Contributor) & Evelyn Rampler (Contributor)

5 Oct 2021

Activity: Talks and presentationsTalk or oral contributionScience to Science


Current limits of non-targeted data pre-processing in small molecule research

Yasin El Abiead (Speaker), Maximilian Milford (Contributor), Harald Schöny (Contributor) & Gunda Köllensperger (Contributor)

7 Sept 2021

Activity: Talks and presentationsTalk or oral contributionScience to Science


Utilizing a counter gradient in reversed phase-based lipid quantification to reduce matrix effects during ionization

Felina Hildebrand (Speaker), Harald Schöny (Contributor), Evelyn Rampler (Contributor) & Gunda Köllensperger (Contributor)

7 Sept 2021

Activity: Talks and presentationsTalk or oral contributionScience to Science


Mass spectrometry-based lipid quantification by reversed phase chromatography utilizing a counter gradient

Felina Hildebrand (Speaker), Harald Schöny (Contributor), Evelyn Rampler (Contributor) & Gunda Köllensperger (Contributor)

11 Jun 2021

Activity: Talks and presentationsTalk or oral contributionScience to Science


Improving Quantitative Genome-Scale Metabolic Modeling of CHO

Diana Széliová (Speaker), David E. Ruckerbauer (Contributor), Jerneja Štor (Contributor), Dmytro Iurashev (Contributor), Harald Schöny (Contributor), Michael Hanscho (Contributor), Stephan Hann (Contributor), Gunda Köllensperger (Contributor), Isabel Rocha (Contributor), Nicole Borth (Contributor) & Jürgen Zanghellini (Contributor)

1 Mar 2021

Activity: Talks and presentationsTalk or oral contributionScience to Science


The other way! - Alternative lipid quantification via RP-LC and 13C-labeled internal standard

Harald Schöny (Speaker), Evelyn Rampler (Contributor), Yasin El Abiead (Contributor), Felina Hildebrand (Contributor), Gerrit Hermann (Contributor) & Gunda Köllensperger (Contributor)

1 Mar 2021

Activity: Talks and presentationsTalk or oral contributionScience to Science


How accurate is my lipid quantification? Insights into internal standardization by uncertainty calculation

Harald Schöny (Speaker), Evelyn Rampler (Contributor), Yasin El Abiead (Contributor), Felina Hildebrand (Contributor), Gerrit Hermann (Contributor) & Gunda Köllensperger (Contributor)

29 Sept 2020

Activity: Talks and presentationsTalk or oral contributionScience to Science


Benchmarking (non-)targeted metabolomics and lipidomics using yeast derived libraries

Evelyn Rampler (Invited speaker), Harald Schöny (Contributor), Yasin El Abiead (Contributor), Mate Rusz (Contributor), Felina Hildebrand (Contributor), Katharina Hohenwallner (Contributor), Veronika Fitz (Contributor) & Gunda Köllensperger (Contributor)

22 Jan 2020

Activity: Talks and presentationsTalk or oral contributionScience to Science


The power of LC-MS based multiomics to explore human adipogenesis

Evelyn Rampler (Speaker), Dominik Egger (Contributor), Harald Schöny (Contributor), Mate Rusz (Contributor), Cornelia Kasper (Contributor), Thomas Nägele (Contributor) & Gunda Köllensperger (Contributor)

22 Jan 2020

Activity: Talks and presentationsTalk or oral contributionScience to Science


13C Internal standardization in lipidomics

Harald Schöny (Invited speaker)

12 Dec 2019

Activity: Talks and presentationsTalk or oral contributionScience to Science


How to solve the limits in absolute quantification on reversed phase LC-MS-based lipidomics approaches? -A novel flow injection/ reversed phase LC-MS workflow with LILY as ISTD

Harald Schöny (Speaker), Evelyn Rampler (Contributor), Felina Hildebrand (Contributor), Olivia Zach (Contributor), Gerrit Hermann (Contributor) & Gunda Köllensperger (Contributor)

10 Nov 2019

Activity: Talks and presentationsTalk or oral contributionScience to Science


Improved identification and quantification of human plasma SRM 1950 using LILY and LC-MS methods

Evelyn Rampler (Speaker), Harald Schöny (Contributor), Yasin El Abiead (Contributor), Michaela Schwaiger-Haber (Contributor), Gerrit Hermann (Contributor) & Gunda Köllensperger (Contributor)

20 Oct 2019

Activity: Talks and presentationsTalk or oral contributionScience to Science


Merging workflows in metabolomics-strategies for increasing throughput, selectivity and coverage

Yasin El Abiead (Contributor), Harald Schöny (Contributor), Mate Rusz (Contributor), Evelyn Rampler (Contributor), Gerrit Hermann (Contributor) & Gunda Köllensperger (Keynote speaker)

16 Jun 2019

Activity: Talks and presentationsTalk or oral contributionScience to Science


13C Internal standardization in lipidomics

Harald Schöny (Speaker), Evelyn Rampler (Contributor), Gerrit Hermann (Contributor), Ulrike Grienke (Contributor), Judith Maria Rollinger (Contributor) & Gunda Köllensperger (Contributor)

25 Mar 2019

Activity: Talks and presentationsTalk or oral contributionScience to Science


13C Internal standardization in lipidomics

Harald Schöny (Speaker), Evelyn Rampler (Contributor), Gerrit Hermann (Contributor) & Gunda Köllensperger (Contributor)

18 Mar 2019

Activity: Talks and presentationsTalk or oral contributionScience to Science


Improved identification and quantification of human plasma SRM 1950 using LILY and LC-MS methods

Evelyn Rampler (Speaker), Harald Schöny (Contributor), Yasin El Abiead (Contributor), Michaela Schwaiger-Haber (Contributor), Gerrit Hermann (Contributor) & Gunda Köllensperger (Contributor)

19 Feb 2019

Activity: Talks and presentationsTalk or oral contributionScience to Science


Standardization in metabolomics and lipidomics workflows

Evelyn Rampler (Contributor), Gerrit Hermann (Contributor), Michaela Schwaiger-Haber (Contributor), Yasin El Abiead (Contributor), Harald Schöny (Contributor) & Gunda Köllensperger (Invited speaker)

10 Apr 2018

Activity: Talks and presentationsTalk or oral contributionScience to Science


Department of Analytical Chemistry

Währinger Straße 38
1090 Wien

harald.schoeny@univie.ac.at