Dipl.-Inform. Dr. Nils Hoffmann
Summer term 2026
270046 VO Bioinformatics II
Winter term 2025
530029 SE Chemoinformatics for Lipidomics - for Master and Diploma Studies
Summer term 2025
270199 VO Bioinformatics II
Hoffmann, N., Ahrends, R., Baker, E. S., Ekroos, K., Han, X., Holčapek, M., Liebisch, G., Wenk, M. R., Xia, Y., & Köfeler, H. C. (2025). Introduction of a lipidomics scoring system for data quality assessment. Journal of Lipid Research, 66(8), Article 100817. https://doi.org/10.1016/j.jlr.2025.100817
National Institute of Standards and Technology, Torta, F., Hoffmann, N., Burla, B., Alecu, I., Arita, M., Bamba, T., Bennett, S. A. L., Bertrand-Michel, J., Brügger, B., Cala, M. P., Camacho-Muñoz, D., Checa, A., Chen, M., Chocholoušková, M., Cinel, M., Chu-Van, E., Colsch, B., Coman, C., ... Wenk, M. R. (2024). Concordant inter-laboratory derived concentrations of ceramides in human plasma reference materials via authentic standards. Nature Communications, 15(1), Article 8562. https://doi.org/10.1038/s41467-024-52087-x
de Jonckheere, B., Kollotzek, F., Münzer, P., Göb, V., Fischer, M., Mott, K., Coman, C., Troppmair, N. N., Manke, M. C., Zdanyte, M., Harm, T., Sigle, M., Kopczynski, D., Bileck, A., Gerner, C., Hoffmann, N., Heinzmann, D., Assinger, A., Gawaz, M., ... Ahrends, R. (2023). Critical shifts in lipid metabolism promote megakaryocyte differentiation and proplatelet formation. Nature Cardiovascular Research, 2(9), 835-852. https://doi.org/10.1038/s44161-023-00325-8
Vondrackova, M., Kopczynski, D., Hoffmann, N., & Kuda, O. (2023). LORA, Lipid Over-Representation Analysis Based on Structural Information. Analytical Chemistry, 95(34), 12600-12604. https://doi.org/10.1021/acs.analchem.3c02039
Schmid, R., Heuckeroth, S., Korf, A., Smirnov, A., Myers, O., Dyrlund, T. S., Bushuiev, R., Murray, K. J., Hoffmann, N., Lu, M., Sarvepalli, A., Zhang, Z., Fleischauer, M., Dührkop, K., Wesner, M., Hoogstra, S. J., Rudt, E., Mokshyna, O., Brungs, C., ... Pluskal, T. (2023). Integrative analysis of multimodal mass spectrometry data in MZmine 3. Nature Biotechnology, 41. https://doi.org/10.1038/s41587-023-01690-2
Kopczynski, D., Krause, D., Al Machot, F., Schwudke, D., Hoffmann, N., & Ahrends, R. (2023). The Past and Future of Lipidomics Bioinformatics. In Mass Spectrometry for Lipidomics: Methods and Applications (pp. 271-290). Wiley. https://doi.org/10.1002/9783527836512.ch10
LORA: Lipid Over-Representation Analysis based on structural information
Vondrackova, M. (Speaker), Kopczynski, D. (Contributor), Hoffmann, N. (Contributor) & Ondře, K. (Contributor)
27 Aug 2023
Activity: Talks and presentations › Talk or oral contribution › Science to Science
